Check the pinion angle in relation to the spring perch angle. This will confirm if there is an issue with the rear end. That is a big number you are reading. I can get you the numbers I read on my rearend, Side note, I checked my pinion angle off the face of the pinion yoke and the machined cover surface while the cover was off - I got the same reading. I also checked that again off the back of my cover (Moser rear cover and has a small flat machined surface) again the measurement was the same. These measurements were on
my rear, but my gut is telling me if you measured your angle off the machined cover surface you should be good. However, since you are getting such a large measurement, maybe drop the driveshaft and measure off the pinion yoke and see what you get. The crank/trans centerline seems to be a good number to me, anything between 0 and about 3 degrees is what most people find (from my reading) and is what I believe manufacturers design to.
@StevieBB54 I initially thought I needed to lower the back of my trans, it just seemed like the shifter was way too high, like in my face! In reality it isn't. My issues are a little different from yours. After checking some driveline angles, then looking at distributor clearance, fan location in the shroud as compared to where they were before my trans swap, I think I may end up spacing the rear of the trans
up a small amount, maybe 1/4". I still need to check driveshaft angle, but my pinion and trans/crank are within a 1 to 1.5 degrees of parallel, a small spacer should bring it to something under 1 degree. Right now I measure my trans centerline at 2.5 down. Or, if my research is correct, I may consider swapping to the 69 307/327 engine stands. I believe these stands with correct mounts move the engine 0.7" forward and about 1/4" down. Lowering the engine or raising the trans effectively gains me the same goal for my situation. That forward movement would help me with a distributor clearance concern I have.
This is a good diagram to explain the working angles in the driveline.