I am new to carb tuning at this level, but have learned this much about chokes. I won't show my ignorance here, but search this forum, there is a boat load of good info on this website.
For the vacuum advance... read the link below. This is absolutely the best info I have seen on this subject. Like
@BillK mentioned, hook up the VA, you do need it and may very well fix all your problem. My BPE 383 had the VA locked out and the choke didn't work right when I got it, it idled very poor. I have since replaced the carb. My new carb (780 DP) has no choke, my VA is hooked up, and my engine idles good... Every engine is different, you just have to find what yours likes.
As many of you are aware, timing and vacuum advance is one of my favorite subjects, as I was involved in the development of some of those systems in my GM days and I understand it. Many people don't, as there has been very little written about it anywhere that makes sense, and as a result, a lot...
www.camaros.net
What is the "90 degree out" comment about?
Call Smeding, from what I have heard they have a great reputation and make an excellent product.
Side note, they do not offer a 650 cfm carb for the 406 if I remember right, probably a 750dp or maybe larger. 406 Eliminator is a 500+ hp engine full of really good stuff. Once you get it running right I am sure you will be very happy with it.